Showing posts with label RNAi. Show all posts
Showing posts with label RNAi. Show all posts

Sunday, April 01, 2012

Competition between ADAR and RNAi pathways for an extensive class of RNA targets


Competition between ADAR and RNAi pathways for an extensive class of RNA targets.

  
Nature structural & molecular biology, Vol. 18, No. 10. (11 October 2011), pp. 1094-1101, doi:10.1038/nsmb.2129

This paper is recommended by Antony Jose (University of Maryland), who writes:

This work is a particularly elegant illustration of the powerful combination of computational methods with biochemical isolation of RNA from different genetic backgrounds. The discovery of numerous sites genome-wide where the transcribed RNA is edited by ADAR is noteworthy.


Saturday, March 24, 2012

A whole-genome RNAi Screen for C. elegans miRNA pathway genes


A whole-genome RNAi Screen for C. elegans miRNA pathway genes.

Current biology : CB, Vol. 17, No. 23. (4 December 2007), pp. 2013-2022, doi:10.1016/j.cub.2007.10.058

I use this paper in my graduate genetics course. It describes a whole-genome screen of C. elegans using RNA interference, provides an example of whole-genome parallel reverse genetic screens, and illustrates both the microRNA biosynthesis pathway and a bit of C. elegans biology.